File Format

All doucuments in this section are used to describe the file layout. Those files include both binary and plaintext format. I use FLML(File layout markup language) to describe file layout.

Biology

• 1. Plink BED file
  • Fam file
  • Bim file
  • Bed file
  • Individuals order across byte
  • References
• 2. GCTA BESD file
  • Epi file
  • Esi file
  • Besd file
• 3. BOD file
  • Oii file
  • Opi file
  • Bod file
• 4. BGEN format
• 5. SAM file
• 6. FASTA file
• 7. GTF file
  • GTF file FLML description
  • Reference
• 8. Browser Extensible Data (BED)

Image

• TIFF file format

Misc

• zlib bytes stream